covid 19 image classification

Regarding the consuming time as in Fig. Fractional Differential Equations: An Introduction to Fractional Derivatives, Fdifferential Equations, to Methods of their Solution and Some of Their Applications Vol. Comput. Methods Med. Our method is able to classify pneumonia from COVID-19 and visualize an abnormal area at the same time. In this subsection, the performance of the proposed COVID-19 classification approach is compared to other CNN architectures. On January 20, 2023, Japanese Prime Minister Fumio Kishida announced that the country would be downgrading the COVID-19 classification. The survey asked participants to broadly classify the findings of each chest CT into one of the four RSNA COVID-19 imaging categories, then select which imaging features led to their categorization. }\delta (1-\delta ) U_{i}(t-1)+ \frac{1}{3! After applying this technique, the feature vector is minimized from 2000 to 459 and from 2000 to 462 for Dataset1 and Dataset 2, respectively. Google Scholar. So, based on this motivation, we apply MPA as a feature selector from deep features that produced from CNN (largely redundant), which, accordingly minimize capacity and resources consumption and can improve the classification of COVID-19 X-ray images. Tensorflow: Large-scale machine learning on heterogeneous systems, 2015. More so, a combination of partial differential equations and deep learning was applied for medical image classification by10. Dual feature selection and rebalancing strategy using metaheuristic optimization algorithms in x-ray image datasets. They were also collected frontal and lateral view imagery and metadata such as the time since first symptoms, intensive care unit (ICU) status, survival status, intubation status, or hospital location. Google Scholar. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. The parameters of each algorithm are set according to the default values. Introduction $Fit_i$ denotes a fitness function value. 78, 2091320933 (2019). This study presents an investigation on 16 pretrained CNNs for classification of COVID-19 using a large public database of CT scans collected from COVID-19 patients and non-COVID-19 subjects. To further analyze the proposed algorithm, we evaluate the selected features by FO-MPA by performing classification. If the random solution is less than 0.2, it converted to 0 while the random solution becomes 1 when the solutions are greater than 0.2. According to the formula10, the initial locations of the prey and predator can be defined as below: where the Elite matrix refers to the fittest predators. Faramarzi et al.37 divided the agents for two halves and formulated Eqs. So, there might be sometimes some conflict issues regarding the features vector file types or issues related to storage capacity and file transferring. Figure5 illustrates the convergence curves for FO-MPA and other algorithms in both datasets. The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema. https://doi.org/10.1016/j.future.2020.03.055 (2020). & Zhu, Y. Kernel feature selection to fuse multi-spectral mri images for brain tumor segmentation. For diagnosing COVID-19, the RT-PCR (real-time polymerase chain reaction) is a standard diagnostic test, but, it can be considered as a time-consuming test, more so, it also suffers from false negative diagnosing4. Syst. Harris hawks optimization: algorithm and applications. Figure3 illustrates the structure of the proposed IMF approach. Propose similarity regularization for improving C. Syst. Cancer 48, 441446 (2012). 22, 573577 (2014). $r_1$ and $r_2$ are the random index of the prey. Acharya et al.11 applied different FS methods to classify Alzheimers disease using MRI images. In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. Also, because COVID-19 is a virus, distinguish COVID-19 from common viral . Classification of COVID19 using Chest X-ray Images in Keras 4.6 33 ratings Share Offered By In this Guided Project, you will: Learn to Build and Train the Convolutional Neural Network using Keras with Tensorflow as Backend Learn to Visualize Data in Matplotlib Learn to make use of the Trained Model to Predict on a New Set of Data 2 hours Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. For both datasets, the Covid19 images were collected from patients with ages ranging from 40-84 from both genders. Whereas, the worst algorithm was BPSO. Machine Learning Performances for Covid-19 Images Classification based Besides, the used statistical operations improve the performance of the FO-MPA algorithm because it supports the algorithm in selecting only the most important and relevant features. arXiv preprint arXiv:2003.11597 (2020). Google Scholar. Shi, H., Li, H., Zhang, D., Cheng, C. & Cao, X. I. S. of Medical Radiology. Therefore, reducing the size of the feature from about 51 K as extracted by deep neural networks (Inception) to be 128.5 and 86 in dataset 1 and dataset 2, respectively, after applying FO-MPA algorithm while increasing the general performance can be considered as a good achievement as a machine learning goal. This study aims to improve the COVID-19 X-ray image classification using feature selection technique by the regression mutual information deep convolution neuron networks (RMI Deep-CNNs). Harikumar, R. & Vinoth Kumar, B. Article Imaging 35, 144157 (2015). MATH Sci. volume10, Articlenumber:15364 (2020) Imaging 29, 106119 (2009). One from the well-know definitions of FC is the Grunwald-Letnikov (GL), which can be mathematically formulated as below40: where $D^{\delta }(U(t))$ refers to the GL fractional derivative of order $\delta$. Machine-learning classification of texture features of portable chest X They also used the SVM to classify lung CT images. A.A.E. Transmission scenarios for middle east respiratory syndrome coronavirus (mers-cov) and how to tell them apart. Eurosurveillance 18, 20503 (2013). & Dai, Q. Discriminative clustering and feature selection for brain mri segmentation. The definitions of these measures are as follows: where TP (true positives) refers to the positive COVID-19 images that were correctly labeled by the classifier, while TN (true negatives) is the negative COVID-19 images that were correctly labeled by the classifier. }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! Abadi, M. et al. Table2 depicts the variation in morphology of the image, lighting, structure, black spaces, shape, and zoom level among the same dataset, as well as with the other dataset. In54, AlexNet pre-trained network was used to extract deep features then applied PCA to select the best features by eliminating highly correlated features. Deep residual learning for image recognition. Evaluation outcomes showed that GA based FS methods outperformed traditional approaches, such as filter based FS and traditional wrapper methods. Isolation and characterization of a bat sars-like coronavirus that uses the ace2 receptor. Some people say that the virus of COVID-19 is. Negative COVID-19 images were collected from another Chest X-ray Kaggle published dataset43. Whereas the worst one was SMA algorithm. Classification Covid-19 X-Ray Images | by Falah Gatea | Medium Dr. Usama Ijaz Bajwa na LinkedIn: #efficientnet #braintumor #mri The evaluation outcomes demonstrate that ABC enhanced precision, and also it reduced the size of the features. One of the best methods of detecting. Cohen, J.P., Morrison, P. & Dao, L. Covid-19 image data collection. https://www.sirm.org/category/senza-categoria/covid-19/ (2020). Thank you for visiting nature.com. Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. So, for a $4 \times 4$ matrix, will result in $2 \times 2$ matrix after applying max pooling. Remainder sections are organized as follows: Material and methods sectionpresents the methodology and the techniques used in this work including model structure and description. Figure6 shows a comparison between our FO-MPA approach and other CNN architectures. One of these datasets has both clinical and image data. et al. In this paper, after applying Chi-square, the feature vector is minimized for both datasets from 51200 to 2000. 4 and Table4 list these results for all algorithms. Fractional-order calculus (FC) gains the interest of many researchers in different fields not only in the modeling sectors but also in developing the optimization algorithms. In addition, the good results achieved by the FO-MPA against other algorithms can be seen as an advantage of FO-MPA, where a balancing between exploration and exploitation stages and escaping from local optima were achieved. In our experiment, we randomly split the data into 70%, 10%, and 20% for training, validation, and testing sets, respectively. In some cases (as exists in this work), the dataset is limited, so it is not sufficient for building & training a CNN. Fung, G. & Stoeckel, J. Svm feature selection for classification of spect images of alzheimers disease using spatial information. A features extraction method using the Histogram of Oriented Gradients (HOG) algorithm and the Linear Support Vector Machine (SVM), K-Nearest Neighbor (KNN) Medium and Decision Tree (DT) Coarse Tree classification methods can be used in the diagnosis of Covid-19 disease. Chong et al.8 proposed an FS model, called Robustness-Driven FS (RDFS) to select futures from lung CT images to classify the patterns of fibrotic interstitial lung diseases. In this paper, filters of size 2, besides a stride of 2 and $2 \times 2$ as Max pool, were adopted. Wu, Y.-H. etal. Also, As seen in Fig. Objective: To help improve radiologists' efficacy of disease diagnosis in reading computed tomography (CT) images, this study aims to investigate the feasibility of applying a modified deep learning (DL) method as a new strategy to automatically segment disease-infected regions and predict disease severity. The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. Among the FS methods, the metaheuristic techniques have been established their performance overall other FS methods when applied to classify medical images. [PDF] COVID-19 Image Data Collection | Semantic Scholar One of the main disadvantages of our approach is that its built basically within two different environments. A properly trained CNN requires a lot of data and CPU/GPU time. Article Latest Japan Border Entry Requirements | Rakuten Travel IEEE Signal Process. The dataset consists of 21,165 chest X-ray (CXR) COVID-19 images distributed on four categories which are COVID19, lung opacity, viral pneumonia, and NORMAL (Non-COVID). arXiv preprint arXiv:2004.07054 (2020). Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. COVID-19 image classification using deep learning: Advances - PubMed (18)(19) for the second half (predator) as represented below. Syst. The $\delta$ symbol refers to the derivative order coefficient. Podlubny, I. Imag. While no feature selection was applied to select best features or to reduce model complexity. SharifRazavian, A., Azizpour, H., Sullivan, J. Springer Science and Business Media LLC Online. Besides, all algorithms showed the same statistical stability in STD measure, except for HHO and HGSO. Also, all other works do not give further statistics about their models complexity and the number of featurset produced, unlike, our approach which extracts the most informative features (130 and 86 features for dataset 1 and dataset 2) that imply faster computation time and, accordingly, lower resource consumption. Classification of Human Monkeypox Disease Using Deep Learning Models Stage 2 has been executed in the second third of the total number of iterations when $\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}$. Comput. Use of chest ct in combination with negative rt-pcr assay for the 2019 novel coronavirus but high clinical suspicion. Inspired by our recent work38, where VGG-19 besides statistically enhanced Salp Swarm Algorithm was applied to select the best features for White Blood Cell Leukaemia classification. Compared to59 which is one of the most recent published works on X-ray COVID-19, a combination between You Only Look Once (YOLO) which is basically a real time object detection system and DarkNet as a classifier was proposed. The shape of the output from the Inception is (5, 5, 2048), which represents a feature vector of size 51200. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2. 42, 6088 (2017). However, it was clear that VGG19 and MobileNet achieved the best performance over other CNNs. E. B., Traina-Jr, C. & Traina, A. J. Ozturk et al. Kong, Y., Deng, Y. In such a case, in order to get the advantage of the power of CNN and also, transfer learning can be applied to minimize the computational costs21,22. Improving COVID-19 CT classification of CNNs by learning parameter Anyone you share the following link with will be able to read this content: Sorry, a shareable link is not currently available for this article. The different proposed models will be trained with three-class balanced dataset which consists of 3000 images, 1000 images for each class. COVID 19 X-ray image classification. Efficient classification of white blood cell leukemia with improved swarm optimization of deep features. The MCA-based model is used to process decomposed images for further classification with efficient storage. (15) can be reformulated to meet the special case of GL definition of Eq. what medical images are commonly used for COVID-19 classification and what are the methods for COVID-19 classification. Rajpurkar, P. etal. The Marine Predators Algorithm (MPA)is a recently developed meta-heuristic algorithm that emulates the relation among the prey and predator in nature37. Nevertheless, a common mistake in COVID-19 dataset fusion, mainly on classification tasks, is that by mixing many datasets of COVID-19 and using as Control images another dataset, there will be . It classifies the chest X-ray images into three categories that includes Covid-19, Pneumonia and normal. Image Classification With ResNet50 Convolution Neural Network - Medium Acharya, U. R. et al. The convergence behaviour of FO-MPA was evaluated over 25 independent runs and compared to other algorithms, where the x-axis and the y-axis represent the iterations and the fitness value, respectively. Our dataset consisting of 60 chest CT images of COVID-19 and non-COVID-19 patients was pre-processed and segmented using a hybrid watershed and fuzzy c-means algorithm. Phys. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. It noted that all produced feature vectors by CNNs used in this paper are at least bigger by more than 300 times compared to that produced by FO-MPA in terms of the size of the featureset. Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Refresh the page, check Medium 's site status, or find something interesting. Moreover, from Table4, it can be seen that the proposed FO-MPA provides better results in terms of F-Score, as it has the highest value in datatset1 and datatset2 which are 0.9821 and 0.99079, respectively. and JavaScript. 115, 256269 (2011). FCM reinforces the ANFIS classification learning phase based on the features of COVID-19 patients. Therefore in MPA, for the first third of the total iterations, i.e., $\frac{1}{3}t_{max}$). Heidari, A. arXiv preprint arXiv:1711.05225 (2017). There are three main parameters for pooling, Filter size, Stride, and Max pool. It based on using a deep convolutional neural network (Inception) for extracting features from COVID-19 images, then filtering the resulting features using Marine Predators Algorithm (MPA), enhanced by fractional-order calculus(FO). The code of the proposed approach is also available via the following link [https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing]. Google Research, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, Blog (2017). AMERICAN JOURNAL OF EMERGENCY MEDICINE COVID-19: Facemask use prevalence in international airports in Asia, Europe and the Americas, March 2020 contributed to preparing results and the final figures. Dhanachandra, N. & Chanu, Y. J. A. A deep feature learning model for pneumonia detection applying a combination of mRMR feature selection and machine learning models. Multi-domain medical image translation generation for lung image Eq. Detection of lung cancer on chest ct images using minimum redundancy maximum relevance feature selection method with convolutional neural networks. Key Definitions. Radiology 295, 2223 (2020). The results are the best achieved on these datasets when compared to a set of recent feature selection algorithms. Feature selection using flower pollination optimization to diagnose lung cancer from ct images. and A.A.E. In this paper, we proposed a novel COVID-19 X-ray classification approach, which combines a CNN as a sufficient tool to extract features from COVID-19 X-ray images. A Novel Comparative Study for Automatic Three-class and Four-class For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and $\zeta$ are the scale and shape parameters. Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. Classification of Covid-19 X-Ray Images Using Fuzzy Gabor Filter and Article arXiv preprint arXiv:1409.1556 (2014). Havaei, M. et al. Book The whale optimization algorithm. A hybrid learning approach for the stagewise classification and By submitting a comment you agree to abide by our Terms and Community Guidelines. Deep Learning Based Image Classification of Lungs Radiography for Detecting COVID-19 using a Deep CNN and ResNet 50 The . Affectation index and severity degree by COVID-19 in Chest X-ray images Med. Arijit Dey, Soham Chattopadhyay, Ram Sarkar, Dandi Yang, Cristhian Martinez, Jesus Carretero, Jess Alejandro Alzate-Grisales, Alejandro Mora-Rubio, Reinel Tabares-Soto, Lo Dumortier, Florent Gupin, Thomas Grenier, Linda Wang, Zhong Qiu Lin & Alexander Wong, Afnan Al-ali, Omar Elharrouss, Somaya Al-Maaddeed, Robbie Sadre, Baskaran Sundaram, Daniela Ushizima, Zahid Ullah, Muhammad Usman, Jeonghwan Gwak, Scientific Reports A comprehensive study on classification of COVID-19 on - PubMed

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